The Best Reconciliation Software for MS Dynamics Business Central

Bank reconciliations in Dynamics 365 Business Central can feel like a maze—especially when you’re dealing with messy bank statement files, unmatched transactions, and complex general ledger entries. But it doesn’t have to be that way.

The best reconciliation software helps you reconcile bank accounts quickly and accurately by automating match logic, reducing data entry, and eliminating the post difference headaches. In this article, we break down the top tools built to improve the bank account reconciliation process for Business Central users.

The Top 5 Reconciliation Software That Integrates With MS Dynamics Business Centr

Not all reconciliation tools play nicely with your ERP. If you’re using Microsoft Dynamics Business Central, it’s essential to choose software that integrates natively or through certified connectors. The tools below offer direct or verified integrations with BC—helping you streamline reconciliations, close faster, and improve accuracy across your finance workflows.

If you’re looking to pick a reconciliation software for MS Dynamics Business Central, you’ve come to the right place.

1. Kolleno

Kolleno is an all-in-one accounts receivable and reconciliation platform built for modern finance teams. Its direct integration with Business Central allows for real-time syncing of invoices, payments, and reconciliation data—eliminating manual matching and reducing time spent chasing outstanding balances. Kolleno is particularly strong in automating collections and applying AI to suggest the most efficient actions for your team.

Key features:

• Native Microsoft Dynamics BC integration
• AI-powered payment reconciliation and invoice matching
• Customisable dunning workflows and smart reminders
• Real-time analytics on AR and collections performance
• Strong user experience with minimal onboarding friction

G2 Rating: 4.9*

2. HighRadius Accounts Receivable

HighRadius offers a comprehensive AR automation suite used by enterprise finance teams to manage collections, cash application, and reconciliation. Its platform integrates with Microsoft Dynamics Business Central via pre-built connectors and APIs, enabling auto-matching of payments, improved cash visibility, and streamlined dispute resolution. It’s especially well-suited to organisations dealing with high transaction volumes.

Key features:

• End-to-end accounts receivable automation
• Payment reconciliation powered by AI and machine learning
• Pre-built ERP connectors, including for Microsoft Dynamics
• Cash forecasting and collections management dashboards
• Dispute and deduction resolution tools

G2 Rating: 4.3*

3. Adra by Trintech

Adra by Trintech is a financial close and reconciliation solution tailored to mid-sized organisations. With a certified connector for Microsoft Dynamics Business Central, Adra automates transaction matching, balance sheet reconciliations, and period-end workflows. Its strength lies in improving visibility and control across the close cycle, reducing manual errors and accelerating team performance.

Key features:

• Direct integration with Dynamics BC via Microsoft AppSource
• Automated transaction matching and reconciliation workflows
• Role-based dashboards for close process oversight
• Task management and audit-ready documentation
• Scalable across multiple entities and currencies

G2 Rating: 4.5*

4. BlackLine Financial Close Management

BlackLine is a market leader in enterprise-grade financial automation. Its Financial Close Management suite offers robust reconciliation, journal entry, and variance analysis tools that integrate directly with Microsoft Dynamics BC. BlackLine is especially valuable for teams looking to reduce risk, meet audit standards, and enforce controls across a high-volume reconciliation environment.

Key features:

• Integration with MS Dynamics and other major ERPs
• Centralized reconciliation dashboards with automated matching
• Pre-built templates for journal entries and close tasks
• Embedded controls for audit and compliance
• Intercompany and multi-entity reconciliation support

G2 Rating: 4.5*

5. FloQast

FloQast is a close management platform designed by accountants for accountants. It integrates with Microsoft Dynamics Business Central to streamline reconciliations, documentation, and team workflows. While it shines most during the month-end close, FloQast also brings automation and transparency to daily and weekly reconciliation processes—especially for fast-growing finance teams.

Key features:

• MS Dynamics BC integration through middleware and APIs
• Collaborative checklists, sign-offs, and audit trails
• Automated reconciliation tie-outs
• Real-time close tracking with progress dashboards
• Seamless integration with Excel and cloud storage

G2 Rating: 4.6*

The Benefits of Integrating Your Reconciliation Software With MS Dynamics Business Central

When your reconciliation software works seamlessly with Microsoft Dynamics Business Central, it transforms how accounting teams handle their financial processes. Rather than juggling multiple systems and manual work, integration creates a centralized platform where all your data flows automatically between your ERP system and reconciliation tools.

For many organizations, this integration proves to be a game changer—turning what was once a time-consuming, error-prone process into a streamlined operation that supports faster month-end closes and more accurate financial reporting.

Automated Data Flow Between Systems

Integration eliminates the manual process of exporting bank statements and importing them into separate reconciliation tools. When your reconciliation software connects directly with Business Central, bank statement lines automatically sync with your bank account ledger entries, creating seamless transaction data flow. Customer payments recorded in Business Central instantly appear in your reconciliation platform, ensuring your statement ending balance always reflects current information and giving accounting teams confidence in their reconciliation accuracy.

Enhanced Transaction Matching Capabilities

Integrated reconciliation software leverages rich data stored in Business Central to improve matching accuracy. Instead of relying solely on amounts and dates, the software cross-references document numbers, customer information, and transaction descriptions from your ERP system. For example, when reconciling accounts, the software can automatically match partial payments against specific invoices by referencing original invoice numbers in Business Central’s bank ledger entries, significantly reducing unmatched transactions requiring manual review.

Centralized Financial Reporting and Analytics

When reconciliation data lives within the same ecosystem as your core financial data, reporting becomes far more powerful. Teams can generate comprehensive reports combining reconciliation status with broader financial metrics, all from one platform. This centralized approach enables better tracking of reconciliation performance over time, helping finance leaders identify trends in unmatched bank transactions and monitor reconciliation cycle times without switching between multiple systems.

Streamlined Period-End Close Process

Integration dramatically improves the month-end and quarter-end close process by ensuring all bank reconciliation data is immediately available within Business Central. Instead of waiting for reconciliation teams to complete work in external systems and manually update the general journal, closing entries can be automatically generated and posted. This streamlined process reduces the risk of costly errors when transferring reconciliation adjustments between systems and provides audit teams with clear trails within the familiar Business Central environment.

Improved Compliance and Audit Trail

ERP systems like Business Central are designed with robust audit controls and user permissions. When reconciliation activities happen within this controlled environment, many organizations benefit from the same security and compliance features protecting their core financial data. This integrated audit trail is particularly valuable during external audits, where auditors can review reconciliation processes using the same tools and reports they use for other financial activities, providing greater confidence and more efficient audit procedures.

Reduced IT Complexity and Maintenance

Managing fewer systems means less complexity for IT teams. When reconciliation functionality integrates with Business Central rather than running as a standalone system, there are fewer security updates to manage and fewer system integrations to monitor. This reduced complexity translates to lower IT costs and more reliable performance. Integration also means that when Business Central receives updates, reconciliation functionality can benefit from these improvements automatically without requiring separate upgrade projects.

the complex matching logic behind the scenes. For example, teams can quickly identify discrepancies, resolve payment issues, and maintain accurate cash flow visibility—all from a single, user-friendly dashboard that integrates seamlessly with their existing Business Central workflows.

Why Kolleno Is the Best Choice for MS Dynamics Business Central Users

Kolleno is purpose-built for finance teams that use Microsoft Dynamics Business Central. It offers a direct integration that syncs your bank transactions and ledger entries automatically, removing the need for manual data entry or spreadsheet work.

Unlike Business Central’s native tools, Kolleno uses AI to match bank statement lines to bank account ledger entries. It handles routine matching with speed and accuracy, while flagging anomalies that need review. This gives your team more control and frees up time for higher-value tasks.

You also get a clear view of your reconciliation status at all times. Whether you’re reviewing daily activity or preparing for month-end, Kolleno helps you stay on top of bank statement files, identify issues early, and post with confidence.

For any business that wants to reduce manual work and improve accuracy in Business Central, Kolleno is a smart, focused solution that delivers fast results.

Final Thoughts

Reconciliation doesn’t need to be a manual, error-prone process—especially if you’re using Microsoft Dynamics Business Central. With the right software, you can speed up reconciliations, improve accuracy, and give your finance team more time to focus on what matters.

Each of the tools featured in this guide offers strong capabilities. But if you’re looking for a platform that combines powerful automation with a seamless Business Central integration, Kolleno is the standout choice.

Book a demo today to see how Kolleno can streamline your reconciliation process and help your team close faster, with less effort.